living matter lab
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==spring 11 - e14 - statics==
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==spring 11 - e14 - applied mechanics: statics==
 
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==syllabus==
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{| class="wikitable" style="text-align:center; width: 100%"
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! day !! date !! !! topic !! notes !! material
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|-
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| tue || jan || 04 || introduction I - cell biology ||  || [http://biomechanics.stanford.edu/me239_11/me239_s01.pdf s01] [http://biomechanics.stanford.edu/me239_11/me239_q01r.pdf q01]
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|-
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| thu || jan || 06 || introduction II - cytoskeletal biology, stem cells || [http://biomechanics.stanford.edu/me239_11/me239_n02.pdf n02] || [http://biomechanics.stanford.edu/me239_11/me239_s02.pdf s02] [http://multimedia.mcb.harvard.edu/anim_innerlife.html l02]
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|-
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| tue || jan || 11 || introduction III - structural mechanics || [http://biomechanics.stanford.edu/me239_11/me239_n03.pdf n03] || [http://biomechanics.stanford.edu/me239_11/me239_s03.pdf s03]
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|-
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| thu || jan || 13 || biopolymers I - energy, tension, bending || [http://biomechanics.stanford.edu/me239_11/me239_n04.pdf n04] || [http://biomechanics.stanford.edu/me239_11/me239_s04.pdf s04]
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|-
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| thu || jan || 13 || homework I - biopolymers, directed stem cell differentiation || [http://biomechanics.stanford.edu/me239_11/me239_h01.pdf h01] || [http://biomechanics.stanford.edu/me239_11/engler06.pdf m04]
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|-
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| tue || jan || 18 || biopolymers II - entropy, FJC and WLC model|| [http://biomechanics.stanford.edu/me239_11/me239_n05.pdf n05] || [http://biomechanics.stanford.edu/me239_11/me239_s05.pdf s05]
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|-
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| thu || jan || 20 || biopolymers III - polymerization kinetics in amoeba ||  [http://biomechanics.stanford.edu/me239_11/me239_n06.pdf n06] || [http://biomechanics.stanford.edu/me239_11/me239_s06.pdf s06] [http://biomechanics.stanford.edu/me239_11/me239_m06.pdf m06]
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|-
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| tue || jan || 25 || cytoskeletal mechanics I - fiber bundle model for filopodia || [http://biomechanics.stanford.edu/me239_11/me239_n07.pdf n07] || [http://biomechanics.stanford.edu/me239_11/me239_s07.pdf s07] [http://biomechanics.stanford.edu/me239_11/vignjevic06.pdf m07]   
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|-
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| thu || jan || 27 || cytoskeletal mechanics II - network model for red blood cells || [http://biomechanics.stanford.edu/me239_11/me239_n08.pdf n08] || [http://biomechanics.stanford.edu/me239_11/me239_s08.pdf s08] 
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|-
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| thu || jan || 27 || homework II - cytoskeleton, cell mechanics challenges || [http://biomechanics.stanford.edu/me239_11/me239_h02.pdf h02] ||  [http://biomechanics.stanford.edu/me239_11/me239_m10.pdf m10]
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|-
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| tue || feb || 01 || cytoskeletal mechanics III - tensegrity model for generic eukaryotic cells ||  [http://biomechanics.stanford.edu/me239_11/me239_n09.pdf n09] || [http://biomechanics.stanford.edu/me239_11/me239_s09.pdf s09] [http://biomechanics.stanford.edu/me239_11/ingber98.pdf m09] 
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|-
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| thu || feb || 03 || biomembranes I - micropipette aspiration in white blood cells and cartilage cells || [http://biomechanics.stanford.edu/me239_11/me239_n10.pdf n10]  || [http://biomechanics.stanford.edu/me239_11/me239_s10.pdf s10]
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|-
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| tue || feb|| 08 || biomembranes II - lipid bilayer, soap bubble, cell membrane || [http://biomechanics.stanford.edu/me239_11/me239_n11.pdf n11] ||    [http://biomechanics.stanford.edu/me239_11/me239_s11.pdf s11]
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|-
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| thu || feb || 10 || biomembranes III - energy, tension, shear, bending || [http://biomechanics.stanford.edu/me239_11/me239_n12.pdf n12] || [http://biomechanics.stanford.edu/me239_11/me239_s12.pdf s12]
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|-
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| tue || feb || 15 || mechanotransduction I - inter- and intracellular signaling, bone cells || [http://biomechanics.stanford.edu/me239_11/me239_n13.pdf n13]  || [http://biomechanics.stanford.edu/me239_11/me239_s13.pdf s13] 
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|-
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| tue || feb || 15 || homework III - micropipette aspiration, final project || [http://biomechanics.stanford.edu/me239_11/me239_h03.pdf h03] || [http://biomechanics.stanford.edu/me239_11/me239_m12.pdf m12]
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|-
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| thu || feb || 17 || summary and midterm preparation || [http://biomechanics.stanford.edu/me239_11/me239_n18.pdf n14]  || [http://biomechanics.stanford.edu/me239_11/me239_s14.pdf s14] 
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|-
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| tue || feb || 22 || midterm ||  || 
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|-
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| thu || feb || 24 || mechanotransduction II - electrophysiology in nerve cells  || [http://biomechanics.stanford.edu/me239_11/me239_n16.pdf n16]  || [http://biomechanics.stanford.edu/me239_11/me239_s16.pdf s16]
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|-
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| tue || mar || 01 || mechanotransduction III - excitation contraction in skeletal muscle and heart cells  || [http://biomechanics.stanford.edu/me239_11/me239_n17.pdf n17] ||  [http://biomechanics.stanford.edu/me239_11/me239_s17.pdf s17] 
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|-
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| thu || mar || 03 || mechanics of the cell - the inner life  || [http://biomechanics.stanford.edu/me239_11/me239_n18.pdf n18] || [https://www.ebiomedia.com/index.php?page=shop.product_details&flypage=shop.flypage&product_id=60&category_id=7&manufacturer_id=0&option=com_virtuemart&Itemid=38 l01] [http://multimedia.mcb.harvard.edu/anim_innerlife.html l02]
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|-
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| tue || mar || 08 || final projects - oral presentations I || [http://biomechanics.stanford.edu/me239_11/me239_p02.pdf p02] ||
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|-
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| thu || mar || 10 || final projects - oral presentations II ||  ||
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|-
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| fri  || mar || 11 || final projects - written projects due || [http://biomechanics.stanford.edu/me239_11/me239_p01.doc p01]  ||
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|-
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|}

Revision as of 21:39, 5 March 2011

spring 11 - e14 - applied mechanics: statics

Hibbeler01.jpg
Hibbeler02.jpg

e14 - statics

ellen kuhl, charbel eid, julianne gould,
estevan mendoza, chris ploch
office hours wed 2:30pm, durand 217

spring 2011
mon wed fri 12:50-2:05
370-370

 

syllabus

day date topic notes material
tue jan 04 introduction I - cell biology s01 q01
thu jan 06 introduction II - cytoskeletal biology, stem cells n02 s02 l02
tue jan 11 introduction III - structural mechanics n03 s03
thu jan 13 biopolymers I - energy, tension, bending n04 s04
thu jan 13 homework I - biopolymers, directed stem cell differentiation h01 m04
tue jan 18 biopolymers II - entropy, FJC and WLC model n05 s05
thu jan 20 biopolymers III - polymerization kinetics in amoeba n06 s06 m06
tue jan 25 cytoskeletal mechanics I - fiber bundle model for filopodia n07 s07 m07
thu jan 27 cytoskeletal mechanics II - network model for red blood cells n08 s08
thu jan 27 homework II - cytoskeleton, cell mechanics challenges h02 m10
tue feb 01 cytoskeletal mechanics III - tensegrity model for generic eukaryotic cells n09 s09 m09
thu feb 03 biomembranes I - micropipette aspiration in white blood cells and cartilage cells n10 s10
tue feb 08 biomembranes II - lipid bilayer, soap bubble, cell membrane n11 s11
thu feb 10 biomembranes III - energy, tension, shear, bending n12 s12
tue feb 15 mechanotransduction I - inter- and intracellular signaling, bone cells n13 s13
tue feb 15 homework III - micropipette aspiration, final project h03 m12
thu feb 17 summary and midterm preparation n14 s14
tue feb 22 midterm
thu feb 24 mechanotransduction II - electrophysiology in nerve cells n16 s16
tue mar 01 mechanotransduction III - excitation contraction in skeletal muscle and heart cells n17 s17
thu mar 03 mechanics of the cell - the inner life n18 l01 l02
tue mar 08 final projects - oral presentations I p02
thu mar 10 final projects - oral presentations II
fri mar 11 final projects - written projects due p01
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